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Institut für Theoretische Informatik

Implementend Haplotyping Algorithms

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Implemented Haplotyping Algorithms

The following algorithms have been implemented in Sun Java 5.0. For each algorithm a short discription, the source code and the Javadocs are available. The Javadocs may not be complete for every algorithm, yet.

PPH
Eskin, Halperin and Karp
Ding, Filkov and Gusfield
PPPH
Gramm, Hartman, Nierhoff, Sharan, Tantau
IPPH
IDP
Pe'er, Pupko, Shamir and Sharan
PP
Gusfield

Java software package

download .jar file

Javadoc

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jar file